Plot fixded coefficients of random effects model
# S3 method for cytoglmm plot(x, order = FALSE, separate = FALSE, ...)
x | A |
---|---|
order | Order the markers according to the mangintute of the coefficients |
separate | create two separate |
... | Other parameters |
ggplot2
object
set.seed(23) df <- generate_data() protein_names <- names(df)[3:12] df <- dplyr::mutate_at(df, protein_names, function(x) asinh(x/5)) glmm_fit <- CytoGLMM::cytoglmm(df, protein_names = protein_names, condition = "condition", group = "donor") #> Warning: moment-based covariance matrix estimate is not positive semi-definite; using projection plot(glmm_fit)