Plot fixded coefficients of group-specific fixed effects model

# S3 method for cytogroup
plot(x, order = FALSE, separate = FALSE, ...)

Arguments

x

A cytoglmm class

order

Order the markers according to the mangintute of the coefficients

separate

create two separate ggplot2 objects

...

Other parameters

Value

ggplot2 object

Examples

set.seed(23)
df <- generate_data()
protein_names <- names(df)[3:12]
df <- dplyr::mutate_at(df, protein_names, function(x) asinh(x/5))
group_fit <- CytoGLMM::cytogroup(df,
                                 protein_names = protein_names,
                                 condition = "condition",
                                 group = "donor")
plot(group_fit)
#> Warning: Removed 10 rows containing missing values (geom_point).