Bayesian Inference

Functions to make inference about the full model using Stan

poisson_lognormal()

HMC sampling for Poisson log-normal mixed model

plot(<cytoeffect_poisson>)

Plot posterior summaries for Poisson log-normal mixed model

plot_distatis()

DiSTATIS plot of posterior or bootstrap samples

plot_pairs()

Posterior multivariate pairs plot for Poisson log-normal mixed model

Frequentist Inference

Functions to make inference about the simplified model using the parametric bootstrap

poisson_lognormal_mcle()

Fit simplified Poisson log-normal model

plot(<cytoeffect_poisson_mcle>)

Plot point estimates for MCLE fit

plot_distatis()

DiSTATIS plot of posterior or bootstrap samples